Project Overview

Dalhousie University invites applications for a funded PhD position under the supervision of Dr. Rob Beiko in the transformative area of environmental DNA (eDNA) analysis. eDNA is revolutionizing how we understand ocean biodiversity. A single drop of seawater can reveal the presence of diverse marine life, making eDNA a critical tool for ecological monitoring and climate action.

This project focuses on developing cutting-edge computational tools and databases to support in situ DNA sequencing using portable and energy-efficient devices. The research will address challenges related to algorithm efficiency, data compression, and real-time processing on devices with limited power and computational capacity. The outcomes of this research will directly contribute to sustainable environmental monitoring practices and the broader understanding of ocean ecosystems, particularly in the context of climate change.

Key Responsibilities

As a PhD candidate, you will:

• Design and optimize algorithms for real-time eDNA analysis on resource-constrained devices.
• Develop and curate databases to support high-efficiency, low-power DNA sequencing in situ.
• Collaborate with multidisciplinary teams, including ecologists, oceanographers, and engineers.
• Publish findings in high-impact journals and present at international conferences.
• Contribute to the broader goals of the Transforming Climate Action network.

Eligibility Requirements

We are hiring candidates with:

• A Master’s or strong Bachelor’s degree in Computer Science, Data Science, Bioinformatics, or a related field.
• Demonstrated experience in algorithm development, database design, or related computational fields.
• Strong programming skills in Python, C++, or similar languages.
• Interest in environmental monitoring, biodiversity, or climate action.
• Excellent written and verbal communication skills.

What We Offer

• Competitive Funding: Dalhousie University offers generous financial support to qualified PhD students, including stipends and research funding.
• World-Class Research Environment: Access to state-of-the-art computational resources and collaboration with a vibrant, multidisciplinary research community.
• Professional Development: Opportunities to attend international conferences, workshops, and seminars.
• Mentorship and Support: Work under the guidance of Dr. Rob Beiko, an expert in computational biology and eDNA analysis, within a globally recognized institution.
• Impactful Research: Contribute to innovative solutions for sustainable ocean monitoring and climate action.

How to Apply?

Interested candidates are encouraged to express their interest by contacting Dr. Rob Beiko at Dalhousie University. Please include the following in your initial inquiry:

1. A cover letter detailing your research interests and alignment with this project.
2. A CV highlighting relevant experience and academic achievements.
3. A summary of past research experience, if applicable.

Applications are reviewed on a rolling basis, so early expressions of interest are encouraged.